Understanding the role of neurodegenerative disease risk genes in the ageing nervous system

Lead Research Organisation: CARDIFF UNIVERSITY
Department Name: UNLISTED

Abstract

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Technical Summary

Though many common neurodegenerative diseases exist in hereditary forms, the vast majority of cases occur sporadically. Human genetic studies have identified many genetic loci and polymorphisms associated with increased risk of developing disorders such as Alzheimer’s disease, however it is frequently unclear how these mutations contribute to pathogenesis. Furthermore it is often the case that the relevant cell type and/or effect upon gene expression accompanying a given genetic association are unclear. Using a combined approach of invertebrate genetics and mammalian cellular model systems we aim to understand how genes associated with increased risk for neurodegenerative diseases contribute to maintenance of the ageing nervous system, focusing on genes linked to sporadic, late-onset Alzheimer’s disease. Using the fruitfly Drosophila melanogaster and powerful invertebrate screening techniques, we aim to understand the effect of cell types specific, altered expression of AD associated genes upon age associated phenotypes, including behaviour, lifespan, neuronal activity, neurodegeneration and autophagosome-lysosome biology. Where appropriate, altered phenotypes and cellular mechanisms identified in our Drosophila screens will be validated in mammalian cell culture system, aiming to identify candidate genes and cellular mechanism for therapeutic intervention.
In addition to our studies of late-onset AD risk genes, we are also utilizing a high-content image analysis approach to understand the contribution of stress on cellular models of amyotrophic lateral sclerosis/frontotemporal dementia. Though ALS and FTD manifest as distinct conditions driven by neurodegeneration in differing regions of the brain, emerging genetic data suggests these disorders exist on a genetic spectrum, with several genes such as C9ORF72 and TBK1 identified in pedigrees where both disorders occur either separately or in combination. The source of this phenotypic heterogeneity within these families is unclear, however is suggestive of genetic or environmental factors modifying pathogenesis. Through use of high-content image analysis we are assessing how different forms of stress (immune, redox, metabolic, etc) induce distinct cellular responses in challenged neurons, and how these are altered by manipulation of genes associated with ALS/FTD. Ultimately we aim to understand how interaction between genetic and environmental factors drive the pathogenesis in these disorders and determine if specific forms of stress result in distinct cellular phenotypes associated with ALS and/or FTD.

Publications

10 25 50

Related Projects

Project Reference Relationship Related To Start End Award Value
MC_PC_16030 01/02/2017 30/11/2021 £970,468
MC_PC_16030/2 Transfer MC_PC_16030 01/04/2017 30/11/2021 £485,234
MC_PC_16030/1 01/11/2018 30/11/2021 £485,234
MC_PC_16030/2 Transfer MC_PC_16030/1 01/04/2017 30/11/2021 £485,234
 
Description ARUK Small Project Grant
Amount £5,000 (GBP)
Organisation Alzheimer's Research UK 
Sector Charity/Non Profit
Country United Kingdom
Start 12/2018 
End 06/2019
 
Description Functional characterisation of newly identified Alzheimer's Disease associated genes in human and invertebrate model systems
Amount £637,641 (GBP)
Funding ID MR/W004879/1 
Organisation Medical Research Council (MRC) 
Sector Public
Country United Kingdom
Start 11/2021 
End 10/2024
 
Description Match funding Cardiff University Neuroscience and Mental Health Institute / UK Dementia Research Institute studentship (funding reported for consumables only - student fees and stipend also awarded through this scheme)
Amount £30,000 (GBP)
Organisation Cardiff University 
Sector Academic/University
Country United Kingdom
Start 10/2018 
End 09/2021
 
Description PhD Studentship - Cardiff University, School of Biosiences: 40% supervision (consumable only reported; stipend and fees are also supported by Cardiff University)
Amount £10,500 (GBP)
Organisation Cardiff University 
Sector Academic/University
Country United Kingdom
Start 10/2018 
End 09/2021
 
Description Recruitment of MRes student through Cardiff University School of Biosciences research programme
Amount £2,000 (GBP)
Organisation Cardiff University 
Sector Academic/University
Country United Kingdom
Start 02/2018 
End 07/2018
 
Description Ser Cymru Enhancing Competitiveness Infrastructure Award
Amount £5,000 (GBP)
Organisation Government of Wales 
Sector Public
Country United Kingdom
Start 03/2020 
End 03/2020
 
Description Wellcome Trust Neuroscience PhD studentship
Amount £130,000 (GBP)
Funding ID 222307/Z/21/Z 
Organisation Wellcome Trust 
Sector Charity/Non Profit
Country United Kingdom
Start 08/2020 
End 09/2023
 
Description ARUK Small Project Grant 
Organisation University of Bristol
Country United Kingdom 
Sector Academic/University 
PI Contribution Collaboration to assay Drosophila models of Alzheimer's disease risk genes identified through epigenome wide association study, working with Dr James Hodge, University of Bristol and Dr Gaynor Smith (Cardiff University, UKDRI).
Collaborator Contribution James Hodge will be conducting learning behavioural analysis of transgenic drosophila Gaynor Smith will be conducting histological and biochemical analysis of transgenic drosophila
Impact £5000 funding split between three research groups - reported in funding
Start Year 2018
 
Description Collaboration with PerkinElmer to conduct high content image analysis 
Organisation PerkinElmer
Country United States 
Sector Private 
PI Contribution PhD studentship to conduct high content image analysis of gene linked to ALS/FTD neurodegeneration.
Collaborator Contribution PerkinElmer have give no-cost access to a field specialist (daily rate = £1850) and TIBCO Spotfire Data Visualisation Software (value £6396).
Impact PhD studentship funding provided through NMHRI and UKDRI at Cardiff University - reported in Funding section.
Start Year 2018
 
Description Proteomic collaboration with University of Dundee 
Organisation University of Dundee
Country United Kingdom 
Sector Academic/University 
PI Contribution Pharmacological inhibition of TBK1 in immortalized neuroblastoma and microglial cells; preparation of samples
Collaborator Contribution Collaboration with Prof Dario Alessi to determine role of TBK1 in regulating neuronal and glial proteome. Alessi lab conducted quantitative TMT LC-MS analysis of neuroblastoma/microglia pharmacologically inhibted for TBK1 activity, and statistical analysis of proteomic data.
Impact Data has been included in presentations assocaited with the MRC Momenum project, and will contribute towards future research publications. Data from these cell lines has also been included in an online proteomics resource being developed by University of Dundee (http://copica.proteo.info/#/home).
Start Year 2021
 
Description Alzheimer's Society Cymru 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Supporters
Results and Impact Alzheimer's Society Cymru conference. Role: invited speaker to diseminate research from UKDRI at Cardiff University.
Year(s) Of Engagement Activity 2019
URL https://twitter.com/SianBlackham/status/1103656067119177728
 
Description Brain Games 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact Brain Games Was an open day at Cardiff Museum, members of the public (largely children) came to learn about Neuroscience through interactive "drop-in" stations, consisting of mind puzzles, arts and crafts and other activities.
Year(s) Of Engagement Activity 2018,2019
URL https://museum.wales/cardiff/whatson/10492/Brain-Games/
 
Description Glial role of small wing/PLCG2 in modifying amyloid associated phenotypes in Drosophila (oral presentation by PhD student assocaited with project) 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Postgraduate students
Results and Impact Glia in Neuroinflammation UK DRI ECR event, London (2021). PhD student attended glia workshop supported by the UK DRI, receiving questions from audience and feedback from experts working within the field of inflammation.
Year(s) Of Engagement Activity 2021
 
Description Investigating Roles of Alzheimer's Disease Risk Genes in Glia Throughout Age, Using Drosophila (oral presentation) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Postgraduate students
Results and Impact ARUK conference 2021 ECR day, Virtual (2021). Online conference for ECRs working within Alzheimer's disease field. Student gave an oral presentation of work assocaited with the project, receiving questions and discussion from the audience.
Year(s) Of Engagement Activity 2021
 
Description Investigating Roles of Alzheimer's Disease Risk Genes in Glia Throughout Age, Using Drosophila (poster presentation) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Neurofly 2020, Virtual (2021). PhD student attended online conference to present and discuss work assocaited with the project. Received questions and discussion from the audience.
Year(s) Of Engagement Activity 2021
 
Description Pint of Science 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact Discussion of uses of Drosophila in neuroscience and dementia research to lay audience.
Year(s) Of Engagement Activity 2019
URL https://pintofscience.co.uk/city/cardiff
 
Description Royal Society of Biology, Dementia Panel: Cardiff University 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact Presentation of Alzheimer's disease genetics and Peters lab research, followed by panel discussion, to local members of Royal Society of Biology.
Year(s) Of Engagement Activity 2019
 
Description STEM abassador training 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Other audiences
Results and Impact Training in local STEM Ambassador Hub (Cardiff) to gain recognition as local STEM ambassador. Planning to attend Brain Games event in Cardiff Museum March 19th 2018 to engage with local lay population.
Year(s) Of Engagement Activity 2018
 
Description TBK1: Another reason to stress about FTD/ALS? (poster delivered by PhD student) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact CytoData 2019, Heidelberg, Germany. PhD student assocaited with the grant attended a bioinformatics conference focused, presented imaging informatic component of their project and received comments and discussion from audience.
Year(s) Of Engagement Activity 2019
 
Description UCL IHA Virtual Symposium: Neurodegeneration in Flies 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Online symposium presentation to discuss research from this project with the international drosophila neurodegenerative disease community.
Year(s) Of Engagement Activity 2021
URL https://www.ucl.ac.uk/biosciences/departments/genetics-evolution-and-environment/research/institute-...
 
Description Understanding Alzheimer's Disease Risk Gene Functions, Using Drosophila Models (poster presented by PhD students assocaited with grant). 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact 3rd Molecular Biology and Ageing conference, Groningen. PhD student received questions and discussion from audience members
Year(s) Of Engagement Activity 2019
 
Description Understanding Alzheimer's Disease Risk Gene Functions, Using Drosophila Models (poster) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact 12th UK Korea Neuroscience symposium, London. Research conference for UK and Korean researchers working across neuroscience
Year(s) Of Engagement Activity 2019
 
Description Understanding Roles of Alzheimer's Risk Genes on Ageing Glia Biology, Using the Power of Drosophila Melanogaster (online poster delivered by student associated with grant) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Alzheimer's Association International Conference: Neuroscience Next, Virtual (2021). PhD student attended virtual meeting to present work assocaited with the grant. Had discussion and questions from audience members about research.
Year(s) Of Engagement Activity 2021
 
Description Understanding Roles of Alzheimer's Risk Genes on Ageing Glia Biology, Using the Power of Drosophila Melanogaster (online poster delivered by student associated with grant) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact AD-PD 2021, Virtual conference. Student delivered poster, recieving questions and discussion from online audience.
Year(s) Of Engagement Activity 2021
 
Description Understanding the role of ALS/FTD gene TBK1 in cellular response to stress (poster delivered by OP). 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Japan-UK Neuroscience Symposium, Chiba, Japan; Internartional meeting bringing together UK and Japanese researchers to discuss advances in neuroscience. Poster generated discussion and interaction with group leaders and graduate students.
Year(s) Of Engagement Activity 2019