Molecular characterisation of bacterium-macrophage interactions: immune evasion, host-specificity and therapeutic potential

Lead Research Organisation: University of Edinburgh
Department Name: The Roslin Institute

Abstract

The early stages of bacterial infections represent a critical 'battle-ground' between bacteria and innate immune cells, the outcome of which often determines infection or clearance. Accordingly, bacterial pathogens have evolved numerous sophisticated mechanisms for counteracting phagocytic killing by neutrophils and macrophages. Staphylococcus aureus is a major global human and livestock pathogen associated with an array of diseases from skin infections and necrotising pneumonia in humans, mastitis in ruminants, to joint infections in chickens. Importantly, multi-drug resistant strains of S. aureus have emerged and disseminated globally in humans and animals, limiting the options for effective treatment. The identification of novel therapeutic targets to reduce our dependence on antibiotics is urgently required. S. aureus can produce an array of molecules which specifically target the innate immune response and we have recently identified and characterised the prototype of a family of toxins which bind to specific receptors on leucocytes to inhibit phagocytosis. The toxin has multiple distinct activities for lymphocyte and leucocyte cell types and is a virulence factor in in an experimental model of infection. We have now identified several related secreted proteins made by S. aureus strains pathogenic for different host species that interact with innate immune cells and likely contribute to survival in specific hosts. Using state-of-the-art techniques in an interdisciplinary project, the project will involve characterisation of the molecular interaction of the proteins with macrophages of human, bovine, porcine and chicken origin. In particular the host-specificity of the interactions and the differential response of the innate immune cells from different host species, will be examined. Furthermore, the role in pathogenesis of the proteins will be examined in appropriate models of infection. Overall, the project will provide new insights into the capacity of a major bacterial pathogen to avoid killing by phagocytes, and to establish infections in human and livestock host species. In addition, the potential for the bacterial proteins to be used as vaccine components or to represent targets for novel therapeutics, will be tested. The project is interdisciplinary , benefiting from supervision by leading bacterial pathogen and macrophage biologists, and the successful candidate will receive a broad training in immunology, bacterial pathogenesis and host-pathogen interactions. The Roslin Institute and the University of Edinburgh in general is an outstanding environment to carry out research into the molecular pathogenesis of infectious diseases with world-leading scientists, excellent support and training opportunities. There will also be the potential for short-term training internships in collaborating laboratories in Europe or the USA.

Publications

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Studentship Projects

Project Reference Relationship Related To Start End Student Name
BB/M010996/1 01/10/2015 31/03/2024
1661990 Studentship BB/M010996/1 07/09/2015 28/08/2019
 
Description Staphylococcus aureus is an important human and livestock pathogen. An S. aureus prophage (Avß) inserted into the chromosome at the ß-toxin gene (ß-converting phage) is present in approximately 90% of human strains and is known to contribute to human-specific innate immune evasion. Comparative genomic analysis of S. aureus isolates from infected poultry has recently revealed an avian-specific subfamily of ß-converting phages. Population analysis revealed that 80% of avian isolates tested carry prophage Avß and that the genes encoded on its putative immune evasion cluster are conserved, suggesting a role in avian host-adaptation. A fAvß-deficient avian S. aureus strain was used to investigate the role of prophage Avß in avian host-pathogen interactions. Compared to the wild type, the fAvß-deficient strain has increased susceptibility to chicken bone-marrow derived macrophage killing. Further investigation using GFP-expressing bacteria has revealed that the fAvß-deficient strain exhibits reduced phagocytosis compared to the wild type, and is associated with decreased killing of macrophages. PCR analysis revealed that prophage Avß is capable of excision from the chromosome, leading to restoration of ß-toxin expression and therefore an intact ß-toxin could influence S. aureus-macrophage interactions. To further dissect whether prophage Avß mediates immune evasion, deletion mutants of three candidate phage effector genes were constructed. No difference in bacterial survival or phagocytosis was observed by single gene deletion mutants compared to the wild type. Finally, RNA-seq analysis was used to decipher the general response of chicken bone-marrow derived macrophages to S. aureus. Toll-like receptor signalling pathways, NF-?B and the type I interferon response are the main drivers of the early chicken macrophage response to S. aureus. Importantly, the transcriptomic analysis of infected macrophages revealed that the presence of prophage Avß (or ß-toxin due to prophage Avß excision), is associated with an inhibition of avian antimicrobial peptide gene expression. Overall, these data provide new insights into innate immune evasion of avian S. aureus and mechanisms of bacterial host-adaptation.
Exploitation Route Future work to uncover the mechanism behind evasion of avian innate immunity by S. aureus may be further investigated by others
Sectors Healthcare

 
Description Roslin Institute Open Day 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact As part of the Roslin Institute Open day and Midlothian Science Festival, I designed and created a public engagement activity called 'HostBusters'. The aim was to explain how bacteria can adapt and spread to different hosts with the use of a fun board game. In the game the players aim to genetically evolve their bacteria to become host-adapted and infect as many hosts as possible.
The day was a success, with over 700 people visiting the Roslin Institute and our activity received great feedback and ideas for improvement. With the help of the Easter Bush Science Outreach Centre, I plan on developing this public engagement activity into a portable and easy-to-access board game and mobile app, which will be used to engage school students and local communities in Edinburgh and Glasgow.
Year(s) Of Engagement Activity 2018