NMR studies of liquid-liquid phase separation in biopharmaceuticals

Lead Research Organisation: University of Manchester
Department Name: Chemistry

Abstract

Protein-based biopharmaceuticals, such as monoclonal antibodies (mAbs), are quickly becoming the drugs of the future, able to treat diseases, from cancer to autoimmune disorders (1,2). The rapid development of these protein-based treatments is often hindered by the instabilities of candidate molecules, including aggregation, precipitation and liquid-liquid phase separation (3,4). Better understanding of the physical nature of such instabilities, and the ways to overcome them, would speed up the development of new drugs, eg cancer treatments. The aim of the current project, in collaboration with MedImmune, one of the world leaders in therapeutic mAbs development, is to explore the molecular mechanisms of liquid-liquid phase separation of IgG1 mAb and other proteins.
The specific objectives of the project would be to study the co-solvent and temperature-dependent mechanism of liquid-liquid phase separation of mAb using NMR spectroscopy and other biophysical techniques. Solution NMR is a powerful method able to report on weak protein-excipient interactions as well as protein self-interactions, and is extremely sensitive to such parameters as rates of molecular translational and rotational diffusion: during the project the student will receive extensive training in advanced NMR spectroscopy, as well as computer-aided analysis. Moreover, through yearly month-long placements at MedImmune, the student will gain exposure to work in the industrial environment, and will be trained in industry-standard biophysical methodologies and skills such as team working and project management. The project provides an enhanced studentship and will suit an ambitious candidate with background in physics, biochemistry and/or biology.

Publications

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Studentship Projects

Project Reference Relationship Related To Start End Student Name
BB/M011208/1 01/10/2015 31/03/2024
1782868 Studentship BB/M011208/1 01/10/2016 31/03/2021
 
Title 19F Dark-state Exchange Saturation Transfer NMR 
Description Dark-state Exchange Saturation Transfer (DEST) NMR allows detection and quantification of NMR-invisible dark states, such as reversible large protein clusters or aggregates. We have developed a novel application of this technique by applying it to 19F nuclei, rather than 1H, 13C, or 15N. By specifically labelling two monoclonal antibodies (mAbs) using different reactive 19F moieties, we can examine their behaviour and interactions in solution using NMR spectroscopy. In the DEST technique, applying saturating RF pulses at offsets away from the visible NMR signals of each mAb allows us to characterise large mAbs clusters that are otherwise invisible to NMR. By fitting the resulting DEST profiles using a MATLAB script developed in house we are able to quantify the populations and apparent size of such clusters, whilst examining the effect of solution conditions, such as protein concentration and temperature, on these variables. 
Type Of Material Technology assay or reagent 
Year Produced 2019 
Provided To Others? Yes  
Impact At present this is a 'just developed' technique, but the technique has potential impacts in the fields of biopharmaceuticals to characterise high-concentration protein formulations. The technique will also be applicable to study protein interactions in biological environments, or to studying liquid-liquid phase separation responsible for membraneless organelles. 
URL https://pubs.acs.org/doi/10.1021/acs.analchem.9b00143
 
Description MIB Open Day for A-Level Students 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Schools
Results and Impact Visit of 200 students to the MIB for an open day - helped to run the NMR stand, engaging students and interesting them in NMR - some reported that NMR was something they'd be interested in later
Year(s) Of Engagement Activity 2017