Automating the Analysis of Aortic Calcifications in DXA Images

Lead Research Organisation: University of Manchester
Department Name: School of Health Sciences

Abstract

Abdominal aortic calcifications (AAC) are build ups of calcium, fat and other material accumulated in the walls of the aorta. Their location and severity have been shown to be an important predictor of death through vascular disease, myocardial infarction and stroke thus their detection in a patient is important for diagnosing problems with the cardiovascular system. It has been shown that AACs can be visible on low dose DXA images of the spine. Large numbers of DXA images of the spine are taken at the Manchester Royal Infirmary for identifying vertebral fractures. The presents an opportunity for early detection of cardio-vascular disease at the same time as vertebral screening. Current scoring systems for measuring AACs are time-consuming for radiologists to perform.

In this project we propose to develop a computer system capable of automatically detecting signs of AACs on DXA images, with minimal human intervention, in order to speed up the analysis of such images.

Objectives:
To write a tool to allow manual annotation of AAC regions in DXA images
To build a large annotated set of DXA images of the spine suitable for training and testing
To develop both semi- and fully-automatic systems for identifying AACs in DXA images
To evaluate the performance of the systems against standard radiologist scoring schemes

The project will build on the Centre's world-class algorithms for accurately locating the vertebrae in images of the spine to identify the regions of the image likely to contain the aorta. Machine learning techniques will be used to develop classifiers to determine regions associated with AACs.

The ability to automatically detect AACs would be of great benefit in early diagnosis of cardio-vascular disease, particularly as it would allow opportunistic application to existing images, potentially identifying the disease on people who might not otherwise be examined.

Publications

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Studentship Projects

Project Reference Relationship Related To Start End Student Name
MR/N013751/1 01/10/2016 30/09/2025
1790130 Studentship MR/N013751/1 01/10/2016 31/03/2020 Luke Chaplin
 
Description MRC Pathways to Impact Scheme
Amount £13,235 (GBP)
Organisation Medical Research Council (MRC) 
Sector Public
Country United Kingdom
Start 07/2020 
End 01/2021
 
Description Bright Club Manchester 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact Two separate events, in which researchers were invited to explain their research to the general public in the form of a stand-up comedy routine. I was approached by several audience members after the talk, who expressed a change in their view of artificial intelligence, and how it can help with diagnosis of disease.
Year(s) Of Engagement Activity 2017,2018
URL http://brightclubmcr.org.uk/
 
Description Have You Heard? Website 
Form Of Engagement Activity Engagement focused website, blog or social media channel
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact Part of the organisational team for a project to dispel the haze that often surrounds the reporting of scientific discoveries. The project includes blog posts, podcasts, videos and live sessions. Information is aimed at a general audience, in particular those audiences not commonly targeted by public science engagement, such as the retired. The aim is to give people a framework for thinking about how credible to think a headline and article are that is reporting a new scientific breakthrough. Feedback has involved changing the public perception of scientists as people, as well as how they think about headlines in the news and how much to trust them.
Year(s) Of Engagement Activity 2018,2019
URL https://haveyouhearduk.com/
 
Description School Visits (Wigan, Shrewsbury, Widnes, Manchester) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Schools
Results and Impact 4 Schools visited in the North West of England. Talks were given to Year 12 pupils that were considering degrees in an area adjacent to biomedical science, with an approximate total of 100 pupils across the schools. I gave a talk detailing my personal journey into science and a PhD, and explained the research I was currently engaged with to increase interest in science research and to explore the options available. Pupils showed interest in the research, and followed up with discussion afterwards about how to get involved in the field or find more information. Feedback from teachers was positive, and demonstrated that the pupils had found the talk inspiring and useful.
Year(s) Of Engagement Activity 2017,2018