DNP enhanced ssNMR of amyloid-beta precursors and fibrils

Lead Research Organisation: University of Nottingham
Department Name: Sch of Physics & Astronomy

Abstract

Alzheimer's disease is a neurodegenerative disorder that is strongly associated with high amyloid-beta concentration in the brain. A method that has been widely used to elucidate the structures formed by the amyloid-beta protein is solid-state nuclear magnetic resonance (ssNMR). The structures of amyloid-beta precursor structures as well as the fibrils which associate to form plaques may provide clues as to the mechanism of destruction caused by the amyloid-beta. My project will initially look to probe the interaction between amyloid-beta and lipid molecules that resemble those found in the membranes of cells using ssNMR. This will reveal the conformation of the protein as it interacts with the phospholipid molecules, with conditions being kept as physiological as possible. This experiment will be repeated with dynamic nuclear polarisation (DNP), which has been shown to significantly increase the signal intensity of ssNMR spectra. Depending on the results of these initial studies, membrane material will be taken from the brain of a mouse to monitor amyloid-beta conformation in more realistic physiological conditions. The molecular interactions of amyloid-beta under these conditions will provide clues as the mechanism by which the protein causes cell death in the brain.

Publications

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Studentship Projects

Project Reference Relationship Related To Start End Student Name
EP/N50970X/1 01/10/2016 30/09/2021
1794242 Studentship EP/N50970X/1 01/10/2016 31/03/2020 Thomas Deo
 
Description Dynamic Nuclear Polarisation (DNP) is a way of dramatically increasing nuclear magnetic resonance(NMR) signal strength, which can be used to analyse protein structure when protein is at low concentration. Amyloid Beta is a short peptide that has been widely implicated in Alzheimer's disease. Study of Amyloid Beta at low concentration have not been possible by conventional soild-state NMR (ssNMR) due to lack of sensitivity. We have shown that Amyloid Beta at low concentration in a cell membrane mimicking environment can be enhanced using DNP and structural details of the peptide can be determined. We have observed specific local structures in Amyloid Beta using this technique.
Exploitation Route Enhancement of Amyloid beta in a membrane environment has been achieved, this additional signal can be used to further investigate Amyloid structure in a phospholipid environment using DNP enhanced solid-state NMR.

Amyloid beta has been shown to have a beta-sheet structure at specific labelled amino acids which provides further evidence for the structure adopted by Amyloid Beta when associated with phospholipids at low concentration.

Amyloid beta structure at low concentration associated with biological extracted rat brain tissue has been studied.
Sectors Healthcare

 
Description Amyloid Beta structure in synaptic rat membrane 
Organisation Binghamton University
Country United States 
Sector Academic/University 
PI Contribution Structural analysis of Amyloid beta peptide in a synaptic rat membrane using Nottingham DNP MAS NMR facility.
Collaborator Contribution Sending of materials required for the study, expertise in incubating peptide with membrane
Impact study ongoing
Start Year 2017