Development of new computational and experimental methods for fragment based drug discovery by NMR
Lead Research Organisation:
University of Leicester
Department Name: Molecular and Cell Biology
Abstract
Many prescribed drugs generate adverse effects, lack efficacy or are poorly adhered to. Central to the concept of precision medicine is the maximisation of drug efficacy and the minimisation of side effects. Due to "Mendelian randomisation" observational studies can provide unconfounded estimates of the effects of genetic variants on treatment response. UK primary care data provides unique opportunities for such observational pharmacogenetic studies. Working with data from the local Extended Study of E-health, Environment and DNA (EXCEED) cohort, the student will develop and validate research methods which can identify signatures of adverse reactions or lack of efficacy in electronic medical records employed in UK primary care. These will then be utilised to undertake well powered pharmacogenetic studies using primary care data in large electronic medical record based studies, including UK Biobank. The student will be based in an internationally leading genetic epidemiology group with a track record of training award winning students. The project will be an excellent vehicle for advanced training in genetic epidemiology. Applicants should have a background in statistics, computational biology, bioinformatics or closely related area coupled with knowledge and/or experience of epidemiology and good computer programming skills.
Publications
Mureddu L
(2019)
Simple high-resolution NMR spectroscopy as a tool in molecular biology.
in The FEBS journal
Studentship Projects
Project Reference | Relationship | Related To | Start | End | Student Name |
---|---|---|---|---|---|
MR/N013913/1 | 30/09/2016 | 29/09/2025 | |||
1853155 | Studentship | MR/N013913/1 | 30/09/2016 | 30/03/2020 | Luca Mureddu |
Description | Three months Internship |
Organisation | Harvard University |
Department | Harvard Medical School |
Country | United States |
Sector | Academic/University |
PI Contribution | During my three months internship I helped the collaborators with my computational expertise in ongoing projects. |
Collaborator Contribution | The collaborators provided large quantity of experimental data for validating my computational works. It also provided an extra project for completing an area of interest relative to my PhD project. |
Impact | Screening of small molecules on new target. New routines for small molecules optimisation Ccpnmr plugin for backbone assignment |
Start Year | 2019 |
Description | Ccpnmr annual practicals |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Postgraduate students |
Results and Impact | Group practicals on the usage of NMR as tool in drug discovery and general biological interest. I was a lead on the practicals which was based using the software and and tools I have developed during my PhD. |
Year(s) Of Engagement Activity | 2017,2018 |
Description | NMR masterclasses practical |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Postgraduate students |
Results and Impact | Masterclass on the usage of NMR as tool in drug discovery. I was a lead on the practical which was based using the software and and tools I have developed during my PhD. |
Year(s) Of Engagement Activity | 2017,2018 |